PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023590.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 185aa MW: 21156.7 Da PI: 9.7969

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023590.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.6	1.3e-15	71	162	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrng..eitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 kfY+eYA+e GF+vr+ ++ k + i k++ sk ++++ + ++ +rr+ra++r+gCka l+++++ ++k++v+++ Cse_sc023590.1_g010.1 71 KFYKEYAREGGFEVRRGGQEGVKPSPkdDISKKDK--SKTDTPSS---DiaevvKVIKRRKRASQRCGCKALLRLRQTPENKYVVYTF 153 6*************9988874333002333322..22222222...2444667999************************** PP FAR1 82 eleHnHela 90 ++HnH+l+ Cse_sc023590.1_g010.1 154 FEKHNHSLV 162 *****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MSNSIEDDSM QGEPSTPRST NNVQDNDVDA ESVTHAGTYQ PTPPGSKFWI PEAKNKPVEG 60 TQFDTIEQAL KFYKEYAREG GFEVRRGGQE GVKPSPKDDI SKKDKSKTDT PSSDIAEVVK 120 VIKRRKRASQ RCGCKALLRL RQTPENKYVV YTFFEKHNHS LVHENDYKYL RSVRKLTFSK 180 QNLLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	1e-08	FAR1 family protein