PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024088.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 250aa    MW: 27697.6 Da    PI: 9.4528
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024088.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.6e-20109158255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                             y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa+a+++a+ +++g
  Cse_sc024088.1_g030.1 109 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEAAARAYDRAAIEFRG 158
                            59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MQRMMIRRPK EETSQAMRRL ASEEEATVMV NVLKNVISGN DSSSTSLRML LPTQLSVPVF  60
PVPVTGTDNC AVCKINGCLG CKLFSDDMNL GYNGGGGGAG GPIKKKKKNY RGVRQRPWGK  120
WAAEIRDPRK AARVWLGTFE TAEAAARAYD RAAIEFRGPR AKLNFAFSDY TTLTLPENSP  180
PVVVAPTNSR KSTKVNNTTK VVKETKPIVE NDFLETIGED DIQEWMMMMM DFKFNDDSSD  240
STFSGNVHSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-29ERF family protein