PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024122.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 649aa    MW: 71747.9 Da    PI: 7.0215
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024122.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.13.4e-27193245255
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                             r++W+ e H++Fv av+qL G++kA+Pk++l+lm+v+gLt+e+v+SHLQkYRl
  Cse_sc024122.1_g010.1 193 LRVVWSIEFHRKFVAAVNQL-GIDKAVPKRVLDLMNVEGLTRENVASHLQKYRL 245
                            69******************.********************************8 PP
2Myb_DNA-binding29.31.9e-09194244148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r  W+ e + ++v av+qlG +   +k++   m+ +g+t++++ s++qky+
  Cse_sc024122.1_g010.1 194 RVVWSIEFHRKFVAAVNQLGIDkaVPKRVLDLMNvEGLTRENVASHLQKYR 244
                            56799999******************************************7 PP
3Response_reg79.61.1e-26221301109
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeeda 86 
                            vl vdD+p+ +ell  +l+k +y +v++++++  al++l+e++  +Dl+++D+ mp+mdG++ll+ i  e  +lp+i+++a+++++++
  Cse_sc024122.1_g010.1  22 VLAVDDDPTCLELLDGLLRKCQY-HVTSTTEAIRALQMLRENRnrFDLVICDVHMPDMDGFKLLEIIGLEM-NLPVILLSANSDPKLV 107
                            799********************.***************999889********************996654.8*************** PP

                            HHHHHTTESEEEESS--HHHHHH CS
           Response_reg  87 lealkaGakdflsKpfdpeelvk 109
                             + +  Ga d+l+Kp+  +el++
  Cse_sc024122.1_g010.1 108 MKGITHGACDYLVKPVRLDELRN 130
                            ********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 649 aa     Download sequence    
MTVEEVRGVN NGIGMFPIGM RVLAVDDDPT CLELLDGLLR KCQYHVTSTT EAIRALQMLR  60
ENRNRFDLVI CDVHMPDMDG FKLLEIIGLE MNLPVILLSA NSDPKLVMKG ITHGACDYLV  120
KPVRLDELRN VWQHVIKEKV ESKYQPKLNN NQDKSNHGSG DPNGELNRKR KDDDEDFVDN  180
GNDDDESSTQ KKLRVVWSIE FHRKFVAAVN QLGIDKAVPK RVLDLMNVEG LTRENVASHL  240
QKYRLYLRRI SQQANMVVAF GGSKDASSYM RTLDGFSDFR SLSGSGRLPN AALSSYAPSG  300
MLSRLNSATG MTLHSLASPS MMQPTHTLNL TDSIAPINKF QPAVLPTPQN HQSTNLFQGI  360
PTSFDPGHLQ QLNKPSSQLS DFNTIDESRI FNGSNTFSSS GGQSSLNIAS SSSTFLDIPP  420
PVGNNFHDQL PPDSSLKYGF TAASNTIIGF GSNTTSTASV PLEGQGQSER HGQYGKPMYS  480
QYSGNAFSTL AAAATPSNDV GLGGPVSQSN DQICGVYNRP NGNDALHMQW NRETGRSSTE  540
LKMGQIGEGE GYLLDQNKLP SVYVTSNGYG SLDDLMNGMI KRESDCPFIG CVDTPMCQRA  600
ISIIPRLLRG RNNLERNLRR VEQDRARIRI LLYVSWMGFA LFVWFTKFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-117ARR-B family protein