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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Cse_sc024143.1_g040.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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| Family | B3 | ||||||||
| Protein Properties | Length: 1118aa MW: 127714 Da PI: 4.3694 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 38 | 2.9e-12 | 61 | 142 | 11 | 90 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS......-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
B3 11 lksgrlvlpkkfaeehggkkeesktltledesg......rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
+ ++ l++p +f+++ g++ ++ktl+l++++g +++ ++ + +ry+l kGWk+F + ++ egD +vFk++ ++++
Cse_sc024143.1_g040.1 61 THNHVLRMPTDFVRSAGID--TKKTLMLRSLDGyemampVQFDTQY--GYHAKRYFLLKGWKDFMQGTNISEGDKCVFKFITSEDK 142
4567899*******99999..4569********7777555555555..888999*************************9975554 PP
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| 2 | B3 | 36.5 | 8.9e-12 | 188 | 277 | 10 | 98 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.....yvltkGWkeFvkangLkegDfvvFkldgrsefel 92
+ ++rl+lp +f++ g++++e +++ +++g + ++ + rk++++ y l++GW+ F ++n++ +gD +v+k++ ++++ +
Cse_sc024143.1_g040.1 188 TDHKSRLYLPTDFVRLAGIDTKE--NIIMISLDGSENQMAI--RKGKRHvastlYQLSEGWRAFMHSNNISQGDKCVLKYITSEDKMC 271
445568********888888655..6***************..777777677889999***********************8888877 PP
EEEEE- CS
B3 93 vvkvfr 98
+ k+++
Cse_sc024143.1_g040.1 272 LAKIIK 277
777765 PP
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| 3 | B3 | 34.1 | 4.7e-11 | 295 | 386 | 7 | 98 |
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
+ + + +++l+lp +f++ ++++e +++++++g++ ++ ++ r ks +y l+ GW F + n++ +gD +vFk++ ++++ +
Cse_sc024143.1_g040.1 295 TISITHKHMLRLPPDFVALARIDTKE--NIIMKSLDGNESQMAVRPdkRFKSAQYNLSLGWVAFKQRNNISQGDECVFKYITSEDKMC 380
566778899*******9766766555..69999****99999996633445555***************************9999999 PP
EEEEE- CS
B3 93 vvkvfr 98
+vk+ +
Cse_sc024143.1_g040.1 381 LVKITK 386
999876 PP
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| 4 | B3 | 33.9 | 5.5e-11 | 421 | 504 | 13 | 96 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
+++l lp +f++ + ++k +++++++g++ ++ l+ ++s ry ++ GW F ++n++ +gD +vFk+++++++ ++ k+
Cse_sc024143.1_g040.1 421 KSMLLLPADFVALARIG--TKKNIIIKSLDGNETQMALQSyeLRCSTRYCFSVGWMAFKRSNNISDGDECVFKYIRSEDKMCLAKI 504
45699*****9555433..34579*************96669999999***************************98877666665 PP
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| 5 | B3 | 31.8 | 2.5e-10 | 539 | 600 | 28 | 89 |
--..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
B3 28 gkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89
++++ t+tl++ +g +++ v r+ks +y+ ++GWkeF ++n++ +gD vFk++ +++
Cse_sc024143.1_g040.1 539 IDTR--ETITLKNDDGceKEMPVHSDKRRKSTSYYVATGWKEFQQSNDISQGDKYVFKFIISED 600
4433..489999999966777777766888888*************************875444 PP
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| 6 | B3 | 41.9 | 1.8e-13 | 671 | 759 | 12 | 98 |
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
++++l+lp +f++ g++++e +++ +++g++ e+++ + rk s +y+l kGW F ++n++ +gD +vFk++ ++++ ++
Cse_sc024143.1_g040.1 671 NKRNLYLPIDFVRLAGIDTKE--NIIMISLDGNECEMTV-WkdtrtRKLSTQYYLLKGWHAFMRSNNISQGDKCVFKYITSEDKVCLA 755
4567********888888655..7***************.435554555555***************************888887777 PP
EEE- CS
B3 95 kvfr 98
k+++
Cse_sc024143.1_g040.1 756 KIIK 759
7765 PP
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| 7 | B3 | 31.9 | 2.4e-10 | 827 | 916 | 10 | 99 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
v+ + +l+lp +f++ +++++e ++++++++g++ ++ + + + ry ++ GW F ++n++ egD +vFk+++++++ ++v+
Cse_sc024143.1_g040.1 827 VNHKFILRLPPHFVALAKIDTRE--KIIIRSLDGNERQMAIHSfkQFRLTRYHFSLGWPAFRRSNNISEGDECVFKYIRSEDKMCLVR 912
6778899*******777777655..7999999998888888443466666799*************************9999989998 PP
EE-S CS
B3 96 vfrk 99
v ++
Cse_sc024143.1_g040.1 913 VTKR 916
8765 PP
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| 8 | B3 | 54.3 | 2.5e-17 | 963 | 1054 | 1 | 90 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkl..iyrkksgryvltkGWkeFvkangLkegDfvvF 82
ff v+++ ++lks++l++p +f+++ g++++ kt+tl++++g +++ v++ +y + +ry+l+kGW +Fv+ n++ +gD +vF
Cse_sc024143.1_g040.1 963 FFVVTITQSNLKSCLLRFPVDFVRSVGIDTK--KTITLKSLDGyeKEMPVRVgtKYHYQAKRYFLSKGWTDFVRCNNISVGDKCVF 1046
89999*********************99954..58888888888888888886577889999************************ PP
EE-SSSEE CS
B3 83 kldgrsef 90
k++ ++++
Cse_sc024143.1_g040.1 1047 KFITSEDK 1054
*9976554 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 1118 aa Download sequence |
MEEVEDEDDV DFVNDGDTDD VGDDDDMDDM DVEDDNDKDE DEDFELVDED DPFFVVTITP 60 THNHVLRMPT DFVRSAGIDT KKTLMLRSLD GYEMAMPVQF DTQYGYHAKR YFLLKGWKDF 120 MQGTNISEGD KCVFKFITSE DKLCLAKITK PPPAXVNDDD DKDEYENENE DVEPVDDVDP 180 FFVATITTDH KSRLYLPTDF VRLAGIDTKE NIIMISLDGS ENQMAIRKGK RHVASTLYQL 240 SEGWRAFMHS NNISQGDKCV LKYITSEDKM CLAKIIKAPA TKVDVNDGDP SFVVTISITH 300 KHMLRLPPDF VALARIDTKE NIIMKSLDGN ESQMAVRPDK RFKSAQYNLS LGWVAFKQRN 360 NISQGDECVF KYITSEDKMC LVKITKASAT EVDDGMDVED DNDTNDDADP FFVVTIIPSH 420 KSMLLLPADF VALARIGTKK NIIIKSLDGN ETQMALQSYE LRCSTRYCFS VGWMAFKRSN 480 NISDGDECVF KYIRSEDKMC LAKITKKITR ATELPAEVDN DDMDDEDRFS PDFVALARID 540 TRETITLKND DGCEKEMPVH SDKRRKSTSY YVATGWKEFQ QSNDISQGDK YVFKFIISED 600 KICLAKITER KSPARSLPPA AEAPVMEVDA DDVEDDDIMD DKDTEDGNDE DDDEDVELVD 660 EDDPFFVTTI NKRNLYLPID FVRLAGIDTK ENIIMISLDG NECEMTVWKD TRTRKLSTQY 720 YLLKGWHAFM RSNNISQGDK CVFKYITSED KVCLAKIIKA QPSQAKKVDV YDEDPSFVVT 780 ITTMHNSMLR FLSDFVTSLP PATDDDEDEN EDVERVYDED PFFVATVNHK FILRLPPHFV 840 ALAKIDTREK IIIRSLDGNE RQMAIHSFKQ FRLTRYHFSL GWPAFRRSNN ISEGDECVFK 900 YIRSEDKMCL VRVTKRNTQA RSSPPTAVDT ETRVDADDVE DDDGIADEDE DEAAELVEDD 960 DPFFVVTITQ SNLKSCLLRF PVDFVRSVGI DTKKTITLKS LDGYEKEMPV RVGTKYHYQA 1020 KRYFLSKGWT DFVRCNNISV GDKCVFKFIT SEDKLCLAKI TKARPTQVDD DVEVDIGMDD 1080 KDAYKDVELV DGVDDAAAIR FCDVVQNRYR GKHNNKNS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G26680.1 | 1e-12 | B3 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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