PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024312.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 307aa MW: 34852.8 Da PI: 9.0135

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024312.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.8	8e-20	20	111	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkr.t..sessstcpyf 82 +Wt++e+ aLiea+r+++ +lrrg+l++p+W+ev++ + + ++++qC++k+e+l+kry+++ ++ ++ + +s+++++f Cse_sc024312.1_g010.1 20 CWTNDETVALIEAYRDKWYSLRRGNLRAPHWQEVADCVfvkCGSDLPKTSIQCRHKMEKLRKRYRNEVQRIGDVpKsvRYKSTSWVHF 107 8*********************************9998777889*****************99998887632125567789999 PP trihelix 83 dqle 86 + ++ Cse_sc024312.1_g010.1 108 KLMD 111 8886 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MDIVSLSQPT PLTRRIPPPC WTNDETVALI EAYRDKWYSL RRGNLRAPHW QEVADCVFVK 60 CGSDLPKTSI QCRHKMEKLR KRYRNEVQRI GDVPKSVRYK STSWVHFKLM DFMELGLDPS 120 DFDDDVDVEG GNEEDLMMYS KGIVKPVQRK YYNALGAGNG IANGNGNGNG VRIRIPSNTV 180 SNPVQVPTLL GIPYYGNGSG NGPGDDYPPS VNRNYGSRKR KEAEEEDVGK SNGNVLDEMV 240 AAINKLGDGL MKMEQMKMDM AREFQSMKMK MDMQRTQMII ESQQKLVDSF LSERMNKKIK 300 RMPSPEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	7e-40	Trihelix family protein