PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024353.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 360aa MW: 40607.1 Da PI: 8.6979

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024353.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.4	1e-30	215	270	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W++eLH+rF++a++qLGG+ +AtPk+i+elmkv+gLt++++kSHLQkYRl+ Cse_sc024353.1_g010.1 215 KERRCWSSELHRRFLHALQQLGGAYVATPKQIKELMKVEGLTNDEIKSHLQKYRLH 270 68****************************************************97 PP
2	Myb_DNA-binding	42	2.2e-13	217	268	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++++a +qlGg t+k I + m +g+t ++ks++qky+ Cse_sc024353.1_g010.1 217 RRCWSSELHRRFLHALQQLGGAyvaTPKQIKELMKvEGLTNDEIKSHLQKYR 268 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MVIYNNPIEF KENVKKYQEY IGALEEERRK IQVFQRELPL CLDLVSQAIE RCREEMSETR 60 FNRCCDQQRC RDHQGPVLEE FIPIKPTSSR NEDDNEKKQI SKKSNIICSK DNSCSFSMKS 120 DWLTSAQLSI QESNPPIEED FLSKNLLVKE KSRNGCDAFH HIQKKKSCVA PLPSLNCADM 180 VKTASVSSSL DTDGGGSDGG GGGCTGEDKG LSNKKERRCW SSELHRRFLH ALQQLGGAYV 240 ATPKQIKELM KVEGLTNDEI KSHLQKYRLH TRRLNPTIHN TPQLVVVGRI WMPPFDYTTK 300 APSSPLIDNA NNTKGVYAPM ASLPSITAPL YKTTACKQQP HLVEKASHRQ RNSPSNLSSI

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MVIYNNPIEF KENVKKYQEY IGALEEERRK IQVFQRELPL CLDLVSQAIE RCREEMSETR  60
FNRCCDQQRC RDHQGPVLEE FIPIKPTSSR NEDDNEKKQI SKKSNIICSK DNSCSFSMKS  120
DWLTSAQLSI QESNPPIEED FLSKNLLVKE KSRNGCDAFH HIQKKKSCVA PLPSLNCADM  180
VKTASVSSSL DTDGGGSDGG GGGCTGEDKG LSNKKERRCW SSELHRRFLH ALQQLGGAYV  240
ATPKQIKELM KVEGLTNDEI KSHLQKYRLH TRRLNPTIHN TPQLVVVGRI WMPPFDYTTK  300
APSSPLIDNA NNTKGVYAPM ASLPSITAPL YKTTACKQQP HLVEKASHRQ RNSPSNLSSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-69	G2-like family protein