PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024405.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 175aa    MW: 18664.1 Da    PI: 5.7422
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024405.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26093.13.2e-29299193
                 DUF260  1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85
                           +C++C+vlr++C+++C+l + +     +++q++++ +v+k+FG++ +l++l+++pe++r+++++sl++eA+ r+ +Pv+Gavg+++++++
  Cse_sc024405.1_g020.1  2 SCNGCRVLRKGCNENCILKQSIsgietAQAQASATVFVAKFFGRAGLLSFLSSVPEHQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNW 91
                           6*********************9998777889********************************************************** PP

                 DUF260 86 qleqlkae 93
                           +++q+++ 
  Cse_sc024405.1_g020.1 92 HVCQSAVA 99
                           ****9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MSCNGCRVLR KGCNENCILK QSISGIETAQ AQASATVFVA KFFGRAGLLS FLSSVPEHQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQSAVAT ILRGGSIQAM PEFFSVEATQ  120
VMTGNNNASE IRFTGSEGGE NSDPWMENVS ETTTSESGTR SGSTCTEAKL LTLFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.19e-64LBD family protein