PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024537.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 337aa    MW: 37587.1 Da    PI: 8.2542
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024537.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.11.2e-55151431129
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeel+++yL +kv + +++  +++++vd++k+ePw+Lp+++k +ekewyfFs rd+ky+tg r+nrat++gyWkatgk
  Cse_sc024537.1_g010.1  15 LPPGFRFHPTDEELITCYLLRKVLDGSFTG-RAFSDVDLNKCEPWELPQRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGK 101
                            79*************************999.88***************99999*********************************** PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                            d+e++s+ +++lvg+kktLvfy+grapkgekt+Wvmheyrle
  Cse_sc024537.1_g010.1 102 DREIYSSkTSALVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 143
                            *****9856778****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MAYFNQHFDN NEACLPPGFR FHPTDEELIT CYLLRKVLDG SFTGRAFSDV DLNKCEPWEL  60
PQRAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSSKT SALVGMKKTL  120
VFYRGRAPKG EKTNWVMHEY RLEGKFAYHF LSKSSKDEWV ISRVFKKSGT GAAGGTVVKK  180
WLTGGTGHTK EVSCSSGVSG SLPPLLDSSL YASATSAYTA ERESFSYDSN TVSKEHVPCF  240
STASTTNFGH PNLFDFPPPE PLATTSFETK NICVSAFPSL RTLQENLQMP FFYSSVVPVP  300
NVGSNNGGET SNYVGSSSTG DNYQKPGPTE LDCIWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.11e-104NAC family protein