PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024598.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 671aa MW: 74925.5 Da PI: 8.2594

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024598.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.2	3.3e-07	47	93	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G+ ++++I ++++ + q++++++ + Cse_sc024598.1_g030.1 47 AWTRQEEESFFSALRQVGKAsfpNFEKITSRVQ-SKNKDQVRHYYYRL 93 6***************99*********.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MTMEPHVSGH EASDIPESVF IKDVITSETH HVASKEPASK KTRQWAAWTR QEEESFFSAL 60 RQVGKASFPN FEKITSRVQS KNKDQVRHYY YRLVRRMNKL LGPELALDAR NCKETNAAML 120 RWWSLLEKQS CKASKLHLKP RRFKIFMENL EHQLLKDRKK NIRKRLIQGE NSSLTPSNAV 180 SNQGRACTQD ARINLVDIQT TQNLNSGKGS SLRRNANTCL DRKGDLSAVK QARQRRRPAT 240 TSTAAYKRWE KAAIAGVSLV ADAAEHLEQT ALDKLVDAVQ YMKRNKSLDP VAREIPPVPH 300 FHQTTVSTKL KLQLFPINEN IRRALEMDNH NPHLELTLSS RKKISSVLEH INRKWGSCSI 360 ASGELMLLPY YAQSSNLESC QKWTQDSVLS AADVYAALGS PSIFRLRYCW SANPPKEPLP 420 TGAAQRSKMT GEEDKGSHKN AAVSVFEWAD SLTNISVSDL LSDVSHHAVS PLRPLGSQSQ 480 QIPFSCDSFD AAIAAHITKN LGNNAVQTTV VSSIWDAEET CDAFTFRKFN TLSEKTHASK 540 ESCNQDTAIS LVRSGSTIEK LREAEEPMED NPAEVESMGE CQSDMNPESG STKDLHALTD 600 IYWPDSLGPL EVNVPLCKYQ SDDLILSDSL GGLTRILASS LDGFQNCPIF GLEQREPPVG 660 DRTIADHKTS S

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MTMEPHVSGH EASDIPESVF IKDVITSETH HVASKEPASK KTRQWAAWTR QEEESFFSAL  60
RQVGKASFPN FEKITSRVQS KNKDQVRHYY YRLVRRMNKL LGPELALDAR NCKETNAAML  120
RWWSLLEKQS CKASKLHLKP RRFKIFMENL EHQLLKDRKK NIRKRLIQGE NSSLTPSNAV  180
SNQGRACTQD ARINLVDIQT TQNLNSGKGS SLRRNANTCL DRKGDLSAVK QARQRRRPAT  240
TSTAAYKRWE KAAIAGVSLV ADAAEHLEQT ALDKLVDAVQ YMKRNKSLDP VAREIPPVPH  300
FHQTTVSTKL KLQLFPINEN IRRALEMDNH NPHLELTLSS RKKISSVLEH INRKWGSCSI  360
ASGELMLLPY YAQSSNLESC QKWTQDSVLS AADVYAALGS PSIFRLRYCW SANPPKEPLP  420
TGAAQRSKMT GEEDKGSHKN AAVSVFEWAD SLTNISVSDL LSDVSHHAVS PLRPLGSQSQ  480
QIPFSCDSFD AAIAAHITKN LGNNAVQTTV VSSIWDAEET CDAFTFRKFN TLSEKTHASK  540
ESCNQDTAIS LVRSGSTIEK LREAEEPMED NPAEVESMGE CQSDMNPESG STKDLHALTD  600
IYWPDSLGPL EVNVPLCKYQ SDDLILSDSL GGLTRILASS LDGFQNCPIF GLEQREPPVG  660
DRTIADHKTS S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	1e-146	MYB_related family protein