PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024652.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Dof
Protein Properties Length: 179aa    MW: 20401.4 Da    PI: 11.8191
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024652.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof99.12.9e-314295357
                 zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrk 57
                            ++++cprC+s++tkfCyy ny++sqPr+fCk+Crr+Wt+GG l n+PvGgg+r 
  Cse_sc024652.1_g050.1 42 PQQRPCPRCQSQDTKFCYY-NYTTSQPRHFCKSCRRHWTHGGVLHNIPVGGGTRY 95
                           57899**************.5********************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MQSSPPHSPN TAIITTTITT TTTTENHQET SNMIITTKKQ LPQQRPCPRC QSQDTKFCYY  60
NYTTSQPRHF CKSCRRHWTH GGVLHNIPVG GGTRYVTTFA PVKYQSAVPP PPVDAAGNVM  120
GPIEGNGFMR AMTPPRREAW PRSHKMDQGA RFRRRVKRRG IRREKARLLV RRGAIFRSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.11e-19Dof family protein