PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024658.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 167aa    MW: 18380.7 Da    PI: 4.8558
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024658.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-161257555
                    AP2  5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           G+  ++++g+WvAeIr+p++   + r++lg++ t+e+Aa+a++ a+++l+g
  Cse_sc024658.1_g010.1 12 GI--RSRNGKWVAEIREPRK---SSRIWLGTYPTPEMAAAAYDVAALALRG 57
                           66..5789*********854...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MSTSGKHPSL HGIRSRNGKW VAEIREPRKS SRIWLGTYPT PEMAAAAYDV AALALRGRDA  60
SLNFPEFVRS YRVPETPEPT LIRNAAGEAA DMIKLCMERE DGHQAGHGGN GVVLGNDEFI  120
DEEAIFDMPN LLVNMAEGMM VSPPRPTSID DRSPVDYSSG CDNLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-41ERF family protein