PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024669.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 182aa MW: 20614.9 Da PI: 7.7551

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024669.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.5	2e-10	27	72	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W++eEd++l++ v+ + +W+t ++ g+ ++k c+ rw++ Cse_sc024669.1_g020.1 27 GAWSKEEDQKLINHVTAHSEVCWRTLPQAAGLLHCGKCCRKRWFDT 72 89***************99******99********976 PP
2	Myb_DNA-binding	50.2	5.8e-16	79	124	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r ++ ++Ed+l+++++++lG++ W++Ia +++ gRt +++ks+w+++l Cse_sc024669.1_g020.1 79 REKFGEDEDDLIIRLHALLGNR-WSLIAGRLP-GRTNNEIKSYWNSHL 124 67999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
KYKSVLKENQ MTKPCCDCDN NNDLNEGAWS KEEDQKLINH VTAHSEVCWR TLPQAAGLLH 60 CGKCCRKRWF DTLSSDHKRE KFGEDEDDLI IRLHALLGNR WSLIAGRLPG RTNNEIKSYW 120 NSHLKKKLVK MGIDPNNQRL PHSFAGTSSN KSCNDNENIG SGSNYNSREE DQESSSSGPV 180 VP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	2e-54	MYB family protein