PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024781.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 145aa    MW: 15708.6 Da    PI: 9.3074
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024781.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding507e-162059647
                           HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +eEde +++a++ +G++ W+tI+r +  gRt++++k++w++ 
  Cse_sc024781.1_g020.1 20 KEEDEVIIQAHEAHGNK-WATISRLLL-GRTDNSIKNHWNST 59
                           69***************.********9.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MTVTNDTNGG NDDGGCNKIK EEDEVIIQAH EAHGNKWATI SRLLLGRTDN SIKNHWNSTL  60
RHLSGSKSVT TKRSFAGVST DSAQRDSGSK RHSAVRTVGC NGPETLLSLV PPGDIKEVEE  120
VKENKLEGFK GKKGLTVLRE SKLLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.11e-17MYB family protein