PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc025018.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 201aa    MW: 23090.2 Da    PI: 9.2924
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc025018.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1287.4e-095702489
                   FAR1 24 rngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                           + g  ++ +++Csk+g++++e ++ ++ +r++++ +t+C+ kl  k  k d+ w +    + HnH++
  Cse_sc025018.1_g030.1  5 DRGYKYSIEYKCSKHGTSTHEGSE-DELQRQTSTAKTNCTFKLLAKYIKgDNGWILRVKCERHNHDF 70
                           456678899************999.888999999***************99999999999*****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
RTKTDRGYKY SIEYKCSKHG TSTHEGSEDE LQRQTSTAKT NCTFKLLAKY IKGDNGWILR  60
VKCERHNHDF LDSVHGFPQA MRLKDHEFVL VEQLTKHKEN DPDNVSSIKT IYNAQNKIRG  120
AIRGDRTPIQ VLLAHLRRLG YTYYDRRKLS LIHDIGSSVA EAWSESIRVI DALIMISLEM  180
NGFAAALAVL KPERLKEDNT E