PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc025084.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 183aa    MW: 21450.6 Da    PI: 9.8327
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc025084.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.31.3e-161562148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg W+++Ed++l +++  +G g+W++I+ + g+ R++k+c++rw +yl
  Cse_sc025084.1_g010.1 15 RGLWSPDEDQKLREYIMNHGLGCWSLIPIHAGLQRSGKSCRLRWINYL 62
                           788*******************************************97 PP
2Myb_DNA-binding44.63.4e-1468113148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            r+ +T  Ed++++ ++ +lG++ W+ I++++  gRt++++k+rw++yl
  Cse_sc025084.1_g010.1  68 RDTFTFHEDDIILTLHGMLGNK-WSQISQHLL-GRTDNEIKNRWHSYL 113
                            7899******************.********9.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MRASPSEKPK LKHKRGLWSP DEDQKLREYI MNHGLGCWSL IPIHAGLQRS GKSCRLRWIN  60
YLRPGLKRDT FTFHEDDIIL TLHGMLGNKW SQISQHLLGR TDNEIKNRWH SYLKKKVDKQ  120
TNSSLESSEA YGCRKLPKIL FADWLCEKGK GDDAFRLFDE IKMVNDFVNS WDVCNSILDS  180
FRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48920.12e-52MYB family protein