PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc025235.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 501aa MW: 57666.4 Da PI: 8.0554

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc025235.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.7	2e-05	104	127	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++Cp+Cg+ F ++ +L+ H++ H Cse_sc025235.1_g020.1 104 HPCPNCGEIFHNPGLLQEHQSIkH 127 78******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MHLGCFIIFP TSRQHHHRPK PPPPSPFPRV STTKHKRHKQ VSSSWSFLKR IFTNSTKCAV 60 STKSCEFKSH NLFDIQKEIS LIQRENHLTT RPGSDPSPMH KEIHPCPNCG EIFHNPGLLQ 120 EHQSIKHALC ELLDDDPGKN VVQIIFESGW PGTKYPTIHR VMKIHNSQQI LAWFEEYRET 180 TKLTSARHRH DPRCIADGNE LLRFHCTTFL CDLGQNGNAT ICTQQYCSLC GIIGSGFSPK 240 LDGISTLSNS YRGHVSVPDD IEDEFGFMNV KRAMLVCRVI AGRVGCDPEI GEKNDPGYDS 300 LVGRESSVVQ TRLDDVNELI VFDPRAIPYL YFFNNDLEFL QHGSDISKKY ATSLTFNIPA 360 TVFSTNVAIE EEATRMFVDK VVDYDIDAKY GIHHWPPRRS LYYRSCQVLR SNKDVYSDKK 420 IVAIMNVTLA TKWDYSFLKE IKVKHQDEQE YDFTEADFPR LSFNEIEDMY LSKVQGRMRQ 480 CSTNIHTRTK NKEKSNQRRQ S

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MHLGCFIIFP TSRQHHHRPK PPPPSPFPRV STTKHKRHKQ VSSSWSFLKR IFTNSTKCAV  60
STKSCEFKSH NLFDIQKEIS LIQRENHLTT RPGSDPSPMH KEIHPCPNCG EIFHNPGLLQ  120
EHQSIKHALC ELLDDDPGKN VVQIIFESGW PGTKYPTIHR VMKIHNSQQI LAWFEEYRET  180
TKLTSARHRH DPRCIADGNE LLRFHCTTFL CDLGQNGNAT ICTQQYCSLC GIIGSGFSPK  240
LDGISTLSNS YRGHVSVPDD IEDEFGFMNV KRAMLVCRVI AGRVGCDPEI GEKNDPGYDS  300
LVGRESSVVQ TRLDDVNELI VFDPRAIPYL YFFNNDLEFL QHGSDISKKY ATSLTFNIPA  360
TVFSTNVAIE EEATRMFVDK VVDYDIDAKY GIHHWPPRRS LYYRSCQVLR SNKDVYSDKK  420
IVAIMNVTLA TKWDYSFLKE IKVKHQDEQE YDFTEADFPR LSFNEIEDMY LSKVQGRMRQ  480
CSTNIHTRTK NKEKSNQRRQ S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	1e-85	C2H2 family protein