PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc025450.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 241aa MW: 27677.7 Da PI: 8.9832

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc025450.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.4	4e-12	78	162	3	89
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 Y +YA+++GF vrks +k+ rng ++++ +vC++eg ++ + + ++k++r+ + + tgCka+++ ++ g + Cse_sc025450.1_g040.1 78 YMKYASKAGFVVRKSCQKRL-RNGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSLNLHITGCKARVMFELIP-GST------HI 157 99**********998887.8999*********999888889998888888999999*******99984.333......33 PP FAR1 85 HnHel 89 HnHel Cse_sc025450.1_g040.1 158 HNHEL 162 55554 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MYFEVTSLRG RLLGFVNPVV KESVTSKLNA LKTHESFSTH SNFDNPGGTL YYIPKVPVDV 60 LLAKGNVYNS VDECISAYMK YASKAGFVVR KSCQKRLRNG IVKQKYLVCN REGCPKGIHV 120 DTLDLENSDK QKRSLNLHIT GCKARVMFEL IPGSTHIHNH ELERKEYKHL SKTERQLTYA 180 EQLFIVKAAC KKHVPDFSFD YLAENAELPA IFWDDEVSKY NYKEFCDVVC FDATYRTNNK 240 K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G19990.2	4e-07	FAR1 family protein