PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc025672.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 192aa    MW: 21866.4 Da    PI: 10.2753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc025672.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.74.2e-081566555
                           HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                    HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                            +  E++RR +++s   +L +l+P+++++p kK  +      +A+ YIk+Lq
  Cse_sc025672.1_g020.1 15 RKTLEKNRRIHMKSLCYKLNSLVPSLMSQPFKKlTTQENQFDHATVYIKQLQ 66
                           5789*********************999*****999999************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MMQTCDQGSS KKPERKTLEK NRRIHMKSLC YKLNSLVPSL MSQPFKKLTT QENQFDHATV  60
YIKQLQKRIE LLKENRGHAL RLVNDSRKND ALCSIENKQK AVSSWLPTVE VKEFEGALQV  120
FLTSNLERKF SLPQVVRIVE DGGGEVVKGG YTIVGDKLIY TIHAKARVTR IGVDVTSVHK  180
ELQELINGSM LR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.19e-17bHLH family protein