PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc025719.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

AP2

Protein Properties

Length: 621aa MW: 69485.5 Da PI: 7.4953

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc025719.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.1	1.9e-12	309	365	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g Cse_sc025719.1_g030.1 309 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 365 78*****************77776664346655.77****************98 PP
2	AP2	47	6.6e-15	408	459	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Cse_sc025719.1_g030.1 408 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 459 78**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MKSMINNNNN NGNNENNKNS NNNWLGFSLS PHMNTNTTTS TMESCPPQSS SSSSNPTAYF 60 NLPPHFNYSN IYGVEGENAA NGIYSAFPIM PLKSDGSLCL MEAITRSQSQ GMVTSLTPPK 120 LENFFGGVTM GTPDSMYYNQ NPDQHQHNNH RHHQQQIQTQ NYQDYNGFRA LYQTVQQEEV 180 KEAHISAADN NLQHHHLPSI GEDDDITGMK NWISRNYHSG VANGTNHGHS GYGDLHSLSL 240 SMSFGTCSQS TPCVTTASSH EQQIIPATPA NNVTDCVVMD TKKRGSEKVD QQKQIVHRKS 300 LDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQGGYDMEE KAARAYDLAA 360 LKYWGPATHI NFPLENYEQE VVEMKNMSRQ EYVAHLRRRS SGFSRGASVY RGVTRHHQHG 420 RWQARIGRVA GNKDLYLGTF STQEEAAEAY DVAAIKFRGV NAVTNFDISR YNVEKIIASN 480 TLLAGELARR TKEVDPTNEL LLDHQSHNRE PKTMSSEPTN SRNMLDWKMT LYDQNRTGPG 540 LEGDESSKHG AHLSNVSSLV TSVSSLREDS PERTNNLPMV LETPPSSTSK FLGNSSANAW 600 IPTAATQMRS HIPVFAAWTD A

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MKSMINNNNN NGNNENNKNS NNNWLGFSLS PHMNTNTTTS TMESCPPQSS SSSSNPTAYF  60
NLPPHFNYSN IYGVEGENAA NGIYSAFPIM PLKSDGSLCL MEAITRSQSQ GMVTSLTPPK  120
LENFFGGVTM GTPDSMYYNQ NPDQHQHNNH RHHQQQIQTQ NYQDYNGFRA LYQTVQQEEV  180
KEAHISAADN NLQHHHLPSI GEDDDITGMK NWISRNYHSG VANGTNHGHS GYGDLHSLSL  240
SMSFGTCSQS TPCVTTASSH EQQIIPATPA NNVTDCVVMD TKKRGSEKVD QQKQIVHRKS  300
LDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQGGYDMEE KAARAYDLAA  360
LKYWGPATHI NFPLENYEQE VVEMKNMSRQ EYVAHLRRRS SGFSRGASVY RGVTRHHQHG  420
RWQARIGRVA GNKDLYLGTF STQEEAAEAY DVAAIKFRGV NAVTNFDISR YNVEKIIASN  480
TLLAGELARR TKEVDPTNEL LLDHQSHNRE PKTMSSEPTN SRNMLDWKMT LYDQNRTGPG  540
LEGDESSKHG AHLSNVSSLV TSVSSLREDS PERTNNLPMV LETPPSSTSK FLGNSSANAW  600
IPTAATQMRS HIPVFAAWTD A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-130	AP2 family protein