PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc025849.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

GeBP

Protein Properties

Length: 353aa MW: 38898.4 Da PI: 4.8768

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc025849.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	90	2.8e-28	132	229	2	98
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqki 88 lf rlwsee ei l+ G++++ ++ +k+p ++i++f+efvk+ ++++v++sq+++K++rL+kKf+++ +k ksgk +fs++h++ + Cse_sc025849.1_g020.1 132 LFARLWSEENEIELIEGMLNYVNEIKKDPIAEINDFHEFVKNDVHVDVTTSQMLNKVKRLRKKFENNYAKfEKSGKVRTFSNPHEKRM 219 799****************************************************************9899*********** PP DUF573 89 felskkiWgs 98 ++ls+ +Wgs Cse_sc025849.1_g020.1 220 YDLSQNLWGS 229 ******95 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MAGSENEHTN SSSTGDEEEE QESTQASDSE PDSEPDKTPQ KKPGTPTLSS TDDSDSDDGD 60 GDGDAPAIAP VKELEKPRSK NQSPSAAVVK RPAAEIDGGD AKRVRVETVV GLAAPDSVNG 120 GGVVDRKDPK QLFARLWSEE NEIELIEGML NYVNEIKKDP IAEINDFHEF VKNDVHVDVT 180 TSQMLNKVKR LRKKFENNYA KFEKSGKVRT FSNPHEKRMY DLSQNLWGSE GNNNVAKSSK 240 KINVTPKVKK GKKSGLGMGN GNVSMDFEVE PKMVQPVRSW RGPEQLGSMG LMVTDEGIMS 300 KGLELLTGAK KAEMEEKWKE LKVQELEHFV RKAELLKEQA EVVLDAVTRS GDN

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MAGSENEHTN SSSTGDEEEE QESTQASDSE PDSEPDKTPQ KKPGTPTLSS TDDSDSDDGD  60
GDGDAPAIAP VKELEKPRSK NQSPSAAVVK RPAAEIDGGD AKRVRVETVV GLAAPDSVNG  120
GGVVDRKDPK QLFARLWSEE NEIELIEGML NYVNEIKKDP IAEINDFHEF VKNDVHVDVT  180
TSQMLNKVKR LRKKFENNYA KFEKSGKVRT FSNPHEKRMY DLSQNLWGSE GNNNVAKSSK  240
KINVTPKVKK GKKSGLGMGN GNVSMDFEVE PKMVQPVRSW RGPEQLGSMG LMVTDEGIMS  300
KGLELLTGAK KAEMEEKWKE LKVQELEHFV RKAELLKEQA EVVLDAVTRS GDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-19	GeBP family protein