PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc025888.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 241aa    MW: 26625.2 Da    PI: 7.0153
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc025888.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.41.5e-39411893114
                    TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg. 88 
                             k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++  + s + s+s+ s+g 
  Cse_sc025888.1_g020.1  41 QKRPTTKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRGSGSTISAGh 128
                            68999***************************************************************88875555555555333334 PP

                    TCP  89 ...................................kaaksaakskksqksaasalnlakes 114
                                                               + a+s +++++++  ++s++n++++s
  Cse_sc025888.1_g020.1 129 ssylrngfnlvtnhptsnmldfespvldprgihmgHVASSYMTQSSNSFTSNSTWNFSNNS 189
                            4456666667776777777777777777777777644444444444444444555655555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MENDHQNYFQ RPNYPLQLLE QRSGDDEIVE LQQQTKPKPQ QKRPTTKDRH TKVDGRGRRI  60
RMPAICAARV FQLTRELGHK SDGETIEWLL QQAEPSVIAA TGTGTIPANF TSLNISLRGS  120
GSTISAGHSS YLRNGFNLVT NHPTSNMLDF ESPVLDPRGI HMGHVASSYM TQSSNSFTSN  180
STWNFSNNSN NSGLHFMNFG TQMGHLHGLQ FDGGAVAETG GSNQGDHYDH QQPETSSSSH  240
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.15e-46TCP family protein