PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026049.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 320aa MW: 36176.6 Da PI: 4.8189

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026049.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.4	1.1e-12	137	184	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++N f +L +lP++ kK++Ka++Le A +YIk+L+ Cse_sc026049.1_g020.1 137 QDHVLAERKRREKLNRNFITLSNVLPNL-----KKMDKASMLEDASNYIKELE 184 56999*********************.....9**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MDMSQGWLAE LEMEDSGYMS YDQMSILYDD IDDYILDSFD SQVYSEKTTT INQTSQTHLS 60 EVNNPSYQEK STSTINKIST TPEPLIPTNL PSSNTFTISF GDLKPKDEPF QFHDLLGYEA 120 AQTTKVSITL RNPIQAQDHV LAERKRREKL NRNFITLSNV LPNLKKMDKA SMLEDASNYI 180 KELEGRVKEL EGTLENNKRK NVDQESVISV KRSRHSSSDD EYYLRDEPTI SGEHTAPCKT 240 TPEIEACILG NTLTVSIQCH KNHSSFIKAL TQMQNLGLSI ISSSSMPFAK THLLITIVAQ 300 IVDDFSMTTT ELVKNLQQSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	148	ERKRRE
2	144	149	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	6e-34	bHLH family protein