PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026072.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 234aa    MW: 26133.2 Da    PI: 10.1681
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026072.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.7e-08126166954
                            HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                             r RR+ri +++  L++l+P       +K++ a++L +A +Y+k L
  Cse_sc026072.1_g030.1 126 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAAHYMKFL 166
                            699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MELMPMMMEL DELPEQFPLP FHDLSDSPLV EFTGASSTTN HHTPSQHGHL MYRTPPPVII  60
PSVHVRALRE FPRGSWFQQK PDSVEAMREM IFRMAALQPV QIDPESVKAP KRRNVKISKD  120
PQSVAARHRR ERISERIRIL QRLVPGGTKM DTASMLDEAA HYMKFLKKQV QTLEQAAATS  180
GGVGAMPTKT SAPVPPPGFN VVTMNNHGTN NQSNLVRACG QPASHMIGSM ELLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.11e-38bHLH family protein