PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026261.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 189aa MW: 21160.7 Da PI: 7.9405

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026261.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.4	7.8e-09	9	41	14	47
HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqky 47 d+v+ G + W+ I + ++ gR++k+c++rw + Cse_sc026261.1_g010.1 9 DLVETQGERKWSVIGSSIP-GRSGKSCRLRWCNQ 41 689999***********.*********985 PP
2	Myb_DNA-binding	46.3	9.9e-15	49	92	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed+ +++a+ +G++ W+ I++ + gRt++ +k++w++ Cse_sc026261.1_g010.1 49 SPFTPHEDDVILRAHLIHGNK-WSVISKLLH-GRTDNAIKNHWNST 92 58*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MSSSSSNDDL VETQGERKWS VIGSSIPGRS GKSCRLRWCN QLSPNVQHSP FTPHEDDVIL 60 RAHLIHGNKW SVISKLLHGR TDNAIKNHWN STLRRRELTL PRSSSESEST QSDDDEGLKN 120 KRRRCVSVSD VSSCDGMTVL TLLPPGDDED TCQVHVMRKM IAKEVRTYID ELKAKDGLSF 180 GPVLHPATQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	4e-38	MYB family protein