PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026316.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 258aa MW: 30181.1 Da PI: 8.6921

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026316.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.2	1.8e-25	75	164	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fYn+YA GF +r++ +ksk+++e++++ +vC+keg+++++ ++ +e ++++r rtgCka+l+++k+kdgkw+ + ++ HnH+ Cse_sc026316.1_g010.1 75 FYNQYAFLHGFGIRIHWDYKSKTTNEVYRKLYVCNKEGFKRHKGNSsNEVSKKRRRDVRTGCKAELRISKTKDGKWCADIFNDTHNHD 162 ***************************************9998856677889999****************************9 PP FAR1 89 la 90 l+ Cse_sc026316.1_g010.1 163 LT 164 95 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MQTRLIEDID KNGYLVDHQN AEYDCERPNY DEVNDDDIWE KPNEDRVNIG CDEIEINDDN 60 ILGKIFNTPD DAYTFYNQYA FLHGFGIRIH WDYKSKTTNE VYRKLYVCNK EGFKRHKGNS 120 SNEVSKKRRR DVRTGCKAEL RISKTKDGKW CADIFNDTHN HDLTLTPTKV MKHRSHNKLH 180 RSMACKSLMV ELGKSGLRPC QVRKVVNAMK SPNEPNVTSK QCADILAEER KQYKGKEFYS 240 LIKHFQEKAA VDAKNILR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-15	FAR1 family protein