PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026332.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 281aa    MW: 31620.7 Da    PI: 8.5628
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026332.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.45.8e-171461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd++l+ +++ +G g+W++ ++  g+ R++k+c++rw +yl
  Cse_sc026332.1_g020.1 14 KGAWTKEEDDRLIAYIRTHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
                           79******************************99************97 PP
2Myb_DNA-binding58.11.9e-1867111147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rg++T++Edel+++++ +lG++ W++Ia +++ gRt++++k++w+++
  Cse_sc026332.1_g020.1  67 RGNFTEDEDELIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111
                            89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGRSPCCEKA HTNKGAWTKE EDDRLIAYIR THGEGCWRSL PKAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TEDEDELIIK LHSLLGNKWS LIAGRLPGRT DNEIKNYWNT HIRRKLLNRG  120
IDPATHRPVT DHPTTTTTTT TTVATTVNNN HNVTSPPPDI ISFATTKTTA HVVKNEDMEE  180
DNKLNITSPD QKQERCPDLN LELRIGPPQH HSSNMIPSIS YMQQPLMTGG TICFACSLGV  240
QDNKECRCST NGTSGNNNNS VGFDFFKIKN GALDYRSLEM K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-95MYB family protein