PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026447.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HB-other

Protein Properties

Length: 363aa MW: 40744.7 Da PI: 9.9977

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026447.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	46.9	4.8e-15	26	80	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR + t +qle+Le+ +++++ psae r eL+k+lgL+++q ++WF rR kek+ Cse_sc026447.1_g030.1 26 KRKRKTFSQLEVLEKTYAREQWPSAELRGELSKELGLSDQQLQIWFWHRRNKEKN 80 455566679********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDGAEGGVGG GESGAAAGEG GRATVKRKRK TFSQLEVLEK TYAREQWPSA ELRGELSKEL 60 GLSDQQLQIW FWHRRNKEKN PQPKKVKRVL LSSSDSESED WNGNIKPSSS IDPPMPSEYV 120 IEWNGKRRRN KKQAQPMEHG ENLVGRRIKV WWAVDNRYYE GVVKSFDCNI MKHKVGVAVH 180 EQVSSSQSDM ICVQGYKVKN INSPILKAIF KSHGDIAAKC VFTNAAVRAS LLEAVCEVVG 240 RIKTNDVTNI ISKMEEIESQ VYVAEAAKIN VSWLRAHLKA IRKMNEAGKK VTMLMELKTN 300 TILVKKAAGT DLRERYTKLV AAQNQFAEAQ RCVDVLNLVE NKLNNNVLES KAEKDMWAGH 360 PII

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDGAEGGVGG GESGAAAGEG GRATVKRKRK TFSQLEVLEK TYAREQWPSA ELRGELSKEL  60
GLSDQQLQIW FWHRRNKEKN PQPKKVKRVL LSSSDSESED WNGNIKPSSS IDPPMPSEYV  120
IEWNGKRRRN KKQAQPMEHG ENLVGRRIKV WWAVDNRYYE GVVKSFDCNI MKHKVGVAVH  180
EQVSSSQSDM ICVQGYKVKN INSPILKAIF KSHGDIAAKC VFTNAAVRAS LLEAVCEVVG  240
RIKTNDVTNI ISKMEEIESQ VYVAEAAKIN VSWLRAHLKA IRKMNEAGKK VTMLMELKTN  300
TILVKKAAGT DLRERYTKLV AAQNQFAEAQ RCVDVLNLVE NKLNNNVLES KAEKDMWAGH  360
PII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	3e-14	HB-other family protein