PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026592.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 735aa MW: 83865.1 Da PI: 5.7409

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026592.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	21.9	3.4e-07	604	636	2	34
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKr 34 +k +s e++++++ +++k+AAkeLgv++++LKr Cse_sc026592.1_g020.1 604 KKILSREEIERHYGKTMKEAAKELGVSVSTLKR 636 67899***************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MADWLGPSEF LESFPTYHLN NNPEPFSDEL LWVFSSKDEG YESNSYLSDD VVAPMMIYDK 60 IKSAFSKMNC YCAFIAQFWA PVTIGGKHQL STSGQPFAVS CLTSAFKKHR RRCVEHVYDI 120 DMNSKFKGTP VSAFLNRFPE ITFISTSVHH EMDPLLRYAF QECGLSNSFM MPIYCPSQTS 180 SSSDCIGVIE CSTWCSPVNL FNEMNLKIKV GSGSECAQCP RSYTIQGKYA FCKYDHNNKL 240 DLSSFVTSLS YCEILHVYKY FTLVQQTING LKLARDQIQE ALKIVCQSHQ ITLAQVWIAS 300 LDENHVDFSS SLEEAQTRRL LGLKLTGYKN IDEDTIDEDT IDEDSIDENN EERCFFQNYY 360 DACDLIPLQP GEEFILKTLQ DFEPRFCKNI SKLGIYKLMG LDWCGGTDKS MGLTICMRSI 420 HTGDFNYVFE FLWTHDSFNP ILLEEILLNI KRCLPNFKFA SGTEIGDKLH VIEVDNSTDK 480 EIKKFDIFQS KRLSPIPEAL KDGNKQVAVN YITPLDTNCK TAPVLLPQQV IEQQFGTSTT 540 EDFLELGDQL QVIDVDSSTE SETQFFKISK EKRLSPIPEA IDKGKKAMVV NYNTRSKRKR 600 DTTKKILSRE EIERHYGKTM KEAAKELGVS VSTLKRWHNN LCKSGWQGPD LLQRKAYNSN 660 KNQSKESHTH EKNNGVIQDP SPVKKNENTV FKAEYADDKI ILHLPISEAT FVTVKNEIGE 720 RQDTVHMPNP KSLQD

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MADWLGPSEF LESFPTYHLN NNPEPFSDEL LWVFSSKDEG YESNSYLSDD VVAPMMIYDK  60
IKSAFSKMNC YCAFIAQFWA PVTIGGKHQL STSGQPFAVS CLTSAFKKHR RRCVEHVYDI  120
DMNSKFKGTP VSAFLNRFPE ITFISTSVHH EMDPLLRYAF QECGLSNSFM MPIYCPSQTS  180
SSSDCIGVIE CSTWCSPVNL FNEMNLKIKV GSGSECAQCP RSYTIQGKYA FCKYDHNNKL  240
DLSSFVTSLS YCEILHVYKY FTLVQQTING LKLARDQIQE ALKIVCQSHQ ITLAQVWIAS  300
LDENHVDFSS SLEEAQTRRL LGLKLTGYKN IDEDTIDEDT IDEDSIDENN EERCFFQNYY  360
DACDLIPLQP GEEFILKTLQ DFEPRFCKNI SKLGIYKLMG LDWCGGTDKS MGLTICMRSI  420
HTGDFNYVFE FLWTHDSFNP ILLEEILLNI KRCLPNFKFA SGTEIGDKLH VIEVDNSTDK  480
EIKKFDIFQS KRLSPIPEAL KDGNKQVAVN YITPLDTNCK TAPVLLPQQV IEQQFGTSTT  540
EDFLELGDQL QVIDVDSSTE SETQFFKISK EKRLSPIPEA IDKGKKAMVV NYNTRSKRKR  600
DTTKKILSRE EIERHYGKTM KEAAKELGVS VSTLKRWHNN LCKSGWQGPD LLQRKAYNSN  660
KNQSKESHTH EKNNGVIQDP SPVKKNENTV FKAEYADDKI ILHLPISEAT FVTVKNEIGE  720
RQDTVHMPNP KSLQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-16	Nin-like family protein