PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026599.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 262aa    MW: 30512.4 Da    PI: 10.2048
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026599.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK65.49e-21450652
                 RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                           + e +++y+++pi++AAk+ ++c T+ Kr+CR++GI+RWP+ k++s+
  Cse_sc026599.1_g010.1  4 TREIIAQYYYMPIAKAAKKFNICITIFKRRCRELGIQRWPYHKLTSI 50
                           67889***************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MTFTREIIAQ YYYMPIAKAA KKFNICITIF KRRCRELGIQ RWPYHKLTSI QLLINTIQAR  60
IKLNLTFFYV THKAENGGAK VDGNTQDIIT RLQKEEKHVE ENPDFEFTKS TKRLRQFYFK  120
SKYKRSKSMS LILSLTNQPT TSVATQLQYS SERSSAKHEN IEDGSQAEDT EVPSLSGILH  180
KSLVIHSKTI VSQDGRIQFY CGLKLTDIVE PFIGPVYLRA SKNKQKELHL HLQVFLWFTI  240
ILALHYLNVE IARRFCGMKR EA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.15e-26Nin-like family protein