PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026603.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 204aa    MW: 23350.1 Da    PI: 6.3687
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026603.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.8e-11751345
                           SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                            W+  Ed+l+ da  +++ +   +W +Ia+ ++ g+t++++++++ 
  Cse_sc026603.1_g040.1  7 TWSRYEDKLFEDALVMYPEDvigRWQKIAASVP-GKTAEEVRNHYE 51
                           7********************************.**********96 PP
2Myb_DNA-binding44.44e-14111155347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
  Cse_sc026603.1_g040.1 111 PWTEEEHRLFLIGLQRYGKGDWRSISRNVVVSRTPTQVASHAQKY 155
                            8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MYQNESTWSR YEDKLFEDAL VMYPEDVIGR WQKIAASVPG KTAEEVRNHY ELLVHDLVLI  60
DSGRVELPSY ADDGVGENDE MYVSWDNELR TSQISFGGVK NKEGERKKGT PWTEEEHRLF  120
LIGLQRYGKG DWRSISRNVV VSRTPTQVAS HAQKYFLRQN SMKKERKRSS IHDITTTTDT  180
MAVPPPPPAN FQGGATQMGY GYPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.13e-70MYB family protein