PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026648.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 158aa    MW: 18440.4 Da    PI: 9.5564
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026648.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.41.1e-0855149290
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 
                             Y +YA+++GF vrks +k+  rng ++++ +  ++eg ++  + +      ++k++r+ + + t+ ka+++  +   + k+++t + 
  Cse_sc026648.1_g020.1  55 VYMKYASKAGFVVRKSCQKRL-RNGIVKQKYLLYNREGCPKGIHVDtldlenSDKQKRSLNLHITSYKARVMFDLIPgTTKYKLTIFY 141
                            69*************998887.8998999999*******9988887889988888888999999*************9********** PP

                   FAR1  83 leHnHela 90 
                              H Hel 
  Cse_sc026648.1_g020.1 142 CIHYHELE 149
                            ******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MFQLKLNALK TPESFSTHFN FDTPGGTVDY IPKVPVDVLL VKINVYNSVD ECISVYMKYA  60
SKAGFVVRKS CQKRLRNGIV KQKYLLYNRE GCPKGIHVDT LDLENSDKQK RSLNLHITSY  120
KARVMFDLIP GTTKYKLTIF YCIHYHELER EEYKFVKD