PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026742.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 155aa    MW: 18040.3 Da    PI: 9.6741
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026742.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601352.8e-42391381100
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            aCaaC+++rrkCa+dC+lapyfp++++++f+n+hklFG+sn++k++++l++ ++++am++++y++++ra+dPv G++++i++lq+q+e
  Cse_sc026742.1_g010.1  39 ACAACRYQRRKCAPDCILAPYFPHDRQRQFQNAHKLFGVSNITKIIRDLDPPQKDEAMRTIIYQSDVRAQDPVGGCYRIIRELQRQIE 126
                            7*************************************************************************************** PP

                 DUF260  89 qlkaelallkee 100
                             ++ael+ + ++
  Cse_sc026742.1_g010.1 127 LSRAELEFVLHQ 138
                            ******988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MTNNFNHNKN INHRHHNHHH LSSSVSTITT TRSNSTTQAC AACRYQRRKC APDCILAPYF  60
PHDRQRQFQN AHKLFGVSNI TKIIRDLDPP QKDEAMRTII YQSDVRAQDP VGGCYRIIRE  120
LQRQIELSRA ELEFVLHQLA VCRAHAMQNQ NQNQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.16e-56LBD family protein