PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027234.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 296aa    MW: 33746.7 Da    PI: 10.6389
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027234.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP125.17.8e-39942431134
                    TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..ssssasec.eaesssssasns 85 
                            aa kkdrhski T++g+RdRRvRls+++ ++fF Lqd LGfdk+skt++WL++++k+ai +l++    +ss++   ++ +++ +++ +
  Cse_sc027234.1_g010.1  94 AASKKDRHSKIFTAQGPRDRRVRLSIDISKKFFGLQDLLGFDKASKTLDWLFTKSKTAIVDLVQEmkHTSSSN-LsDQCEEVFMDKGD 180
                            589**************************************************************75233332.23455555555544 PP

                    TCP  86 ssg.............kaaksaakskksqksaasalnlak.esrakarararertrekmrikn 134
                            + +             +  k+++k+ ++qk   +++  a+ + ra+ararar rt ek rik+
  Cse_sc027234.1_g010.1 181 QVEmkgkkkkvvakcfNVGKKKKKTAQKQKFGFNVNVAARsQLRAEARARARVRTIEKLRIKK 243
                            44455566667866653333333333333333333333335777****************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MFNSSNPFPS SCHGFHPPSG FFSGQEKDGG YYNHHPFVAQ DCSFNHAPLP PPPPIKVSHL  60
ENHDKNNHNY SKGHDHNHLN SSDSVISPPR KRVAASKKDR HSKIFTAQGP RDRRVRLSID  120
ISKKFFGLQD LLGFDKASKT LDWLFTKSKT AIVDLVQEMK HTSSSNLSDQ CEEVFMDKGD  180
QVEMKGKKKK VVAKCFNVGK KKKKTAQKQK FGFNVNVAAR SQLRAEARAR ARVRTIEKLR  240
IKKLYNDAKN VIGDRLNHIR FHVLDLPKAR FVFRTNICSM LERSSCKDTC KFIIID
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187204KKKKVVAKCFNVGKKKKK
2187208KKKKVVAKCFNVGKKKKKTAQK
3188205KKKKVVAKCFNVGKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.14e-25TCP family protein