PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027544.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 202aa    MW: 23284 Da    PI: 4.8756
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027544.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-1965115255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                             y+GVr ++ +g+++AeIrd ++ng   r++lg+f+tae Aa a+++a+ +l+g
  Cse_sc027544.1_g010.1  65 AYRGVRKRP-WGKYAAEIRDSTQNG--LRVWLGTFDTAEAAALAYDQAAYALRG 115
                            69*******.**********77787..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MDSSYFYNPM ASFSPPEYHS NHHFLPFTEN DSQDMLLYGV IGDFAGQTQY CPVEPVKYRE  60
EKESAYRGVR KRPWGKYAAE IRDSTQNGLR VWLGTFDTAE AAALAYDQAA YALRGSFAVL  120
NFTEELAYES LKEMGYMYEE GTSPVLALKR MHSIKRKHEM KRKKREDSMK DDQNVVVFED  180
LGSDYLEELL GVDDGCNTST RW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-54ERF family protein