PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027805.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 161aa    MW: 18267.5 Da    PI: 7.7559
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027805.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260102.24.8e-3228128197
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqp...kkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklq 84 
                            +CaaC++++ +C++dC+lapyf ++q     + +nvh lFG +n+ k+l+++++e+ r+dam+sl+ye +ar rdP+ G+++++ +lq
  Cse_sc027805.1_g010.1  28 ECAACRFHNTRCPPDCILAPYFSQAQDdiiIQVQNVHALFGFQNIRKMLTNIDDETrRDDAMTSLMYEVDARGRDPIGGCHRIVCALQ 115
                            5*********************8877545589********************888768****************************** PP

                 DUF260  85 qqleqlkaelall 97 
                             q+++++ el+ +
  Cse_sc027805.1_g010.1 116 GQYASARRELEFV 128
                            ********99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MSTQKNHPNN PNHNNNHPSS RKCSTNHECA ACRFHNTRCP PDCILAPYFS QAQDDIIIQV  60
QNVHALFGFQ NIRKMLTNID DETRRDDAMT SLMYEVDARG RDPIGGCHRI VCALQGQYAS  120
ARRELEFVTR LNALCKGMYG SAKQKQDIVN DQGFDLDISV R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.16e-23LBD family protein