PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027814.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 220aa    MW: 24886.9 Da    PI: 6.7252
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027814.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.000351702061354
                            HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            R+++++  ++Lre++P       k ++ +++  +Av+Y+ksL
  Cse_sc027814.1_g020.1 170 REKMRKMVNTLREIVPGG-----KQMNSVAVIDEAVKYLKSL 206
                            7999999*********87.....67***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MQSDHQHLHS NTKLPLADQV GRGYIPNPHI ESFFSQNVDF QPSKICPRNF IIFDRTDNRS  60
QIMYHPAVSP GIGHPGTSYI ENNMLVRNNV NAPRELNSVT KEDSADIDLL LSFEEEDSEE  120
EYEEDELSTA RTHRNDLKDT ADSCSSRLVK SRLALSSFSH KSSGSSERKR EKMRKMVNTL  180
REIVPGGKQM NSVAVIDEAV KYLKSLKVEL QKVGVANLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.15e-26bHLH family protein