PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc027847.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 255aa MW: 28907.7 Da PI: 8.1234

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc027847.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.5	1.2e-13	82	134	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ h e+Er+RR+++ + ++ Lr llP + ++K s ++ +Av+YIk++q Cse_sc027847.1_g010.1 82 RKLVHREIERQRRQDMAKLYASLRGLLPLEF--VKGKRSTSDHMHQAVNYIKHMQ 134 5678***********************65..*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MFSFQQSDEL VFHQIPSLIS FQQPATNQQD LIVEDKDHVT MEGNTNKSVS KTRKRQEDQS 60 PSSSKPNSAT PDDSTKDEHT QRKLVHREIE RQRRQDMAKL YASLRGLLPL EFVKGKRSTS 120 DHMHQAVNYI KHMQDNIKEM TVKRDQLKKF VEMSVSGLGT NSNEKNLTNL LPNTVSLHSS 180 NGGIEISINS CPLEEGFPLS RILKAISKEG FKVITCTCTK VNDRLIHSIQ AEANDPVLTD 240 LSMLQQWLTV VANNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25400.1	1e-39	bHLH family protein