PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027847.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 154aa    MW: 17721.4 Da    PI: 10.5244
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027847.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.99.2e-151871090
                   FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                           +GF +rks++k+  r+g ++++ +vC++eg +++ + +       +k+ rt++   tgCka+ + +++  + k+++t+++ eHnHel 
  Cse_sc027847.1_g020.1  1 AGFGIRKSTQKRL-RDGFVKEKYLVCNREGCPKKIRLNtlapkkGDKQVRTSNFRITGCKARAVFHMMPgNRKYRLTTFDVEHNHELD 87
                           6*******99988.9999**************998888899887788888999999*************9****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
AGFGIRKSTQ KRLRDGFVKE KYLVCNREGC PKKIRLNTLA PKKGDKQVRT SNFRITGCKA  60
RAVFHMMPGN RKYRLTTFDV EHNHELDRVE YKHLSKSERK LTYTEQLFII KASNYNIGAT  120
RAHSLYTGLK GSSALVHGTE TEFNNLVRDC IENL