PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027908.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 218aa    MW: 23446.8 Da    PI: 7.381
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027908.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.000185173123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           y+C++C + F ++  L  H++ H
  Cse_sc027908.1_g010.1 51 YECNYCYREFANSQALGGHQNAH 73
                           99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MGELDHYQQA KPTNNTTTRL KIFGFDVPED EEEVESTKTP SGSSDSGGRK YECNYCYREF  60
ANSQALGGHQ NAHKKERQQL KRAQMQASRN AAVSYIRNPI ISAFAPPPHL LTNTGPMVIP  120
SSAVANPSWV YVPRAAPAFH VSHGCVLPSG ASSPSIGRGP GSLSYTGSVG DSSMTSVGPQ  180
PNHRVHHHDD GPSLSRFSRA DGGPSFDDSY GLDLHLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.19e-17C2H2 family protein