PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc027979.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 225aa MW: 25682.2 Da PI: 9.5088

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc027979.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.9	3.8e-14	31	124	19	90
FAR1 19 skkskrngeitkrtfvCskegkreeekkk.......................tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 ++k k t + f+Cs++g +e+++ k ++k+ r+r++ r+gC a+l++kk + +evtk+e Cse_sc027979.1_g050.1 31 QYKAKGFSDATLKYFYCSRQGLNEDSNGKsvtdndisgqseisddshrfgdvKKKQTRKRTSFRCGCSASLTIKKI-GNIYEVTKFED 117 56666677788999********999999****************99899999999***********.9****** PP FAR1 84 eHnHela 90 HnH+l+ Cse_sc027979.1_g050.1 118 GHNHPLV 124 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MLKLFELEIM LVFMFVEKME LELEEVAXGG QYKAKGFSDA TLKYFYCSRQ GLNEDSNGKS 60 VTDNDISGQS EISDDSHRFG DVKKKQTRKR TSFRCGCSAS LTIKKIGNIY EVTKFEDGHN 120 HPLVAEKDMI FLKNSRKMGY TKQHFLYQVS NANFGPAVGF RLMKQVYGGF DRVGTTVIDC 180 KNQKKKISVF IGDRDAQMAV EKLLSRKLHS PGFYVNYYKG DAYIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-10	FAR1 family protein