PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc028012.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 261aa MW: 29200.1 Da PI: 4.8546

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc028012.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.6	5.4e-14	121	167	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +ErrRR+++N+ f L ++lP++ kK++Ka++Le A +YIk+Lq Cse_sc028012.1_g020.1 121 DHVFAERRRREKLNQNFISLSSVLPSL-----KKMDKASMLEDASNYIKELQ 167 57789********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MEDPLFMSDD QMNILSDDVN NFSVNSFYSE IYAETTTCID QTFQTQQPEI RQETSSSISK 60 SSTTLDPLVT NSLPSSKTFT ISFGDLKPKE ETLQFHDSLG YEAARTTKVS ITLRNPIQAQ 120 DHVFAERRRR EKLNQNFISL SSVLPSLKKM DKASMLEDAS NYIKELQGRV KELEGTLKPD 180 NKRKNVDQES GSNVTVTIQC QNNSSSFIKA LTQMQKLGLS IICSSAMPFV MTILLITIVA 240 QIVDDFSMTP AELAKSLQLA I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	126	131	ERRRRE
2	127	132	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	5e-25	bHLH family protein