PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc028174.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 255aa MW: 28381.8 Da PI: 6.0284

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc028174.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00034	103	125	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H Cse_sc028174.1_g010.1 103 FPCNYCQRKFFSSQALGGHQNAH 125 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MKLSKSLNLE NEVHEDDDSD NSSQVASNIS VQTPFSSPLM DSLNIPETFQ TIDDPVSLEL 60 SLTFNSNLDK FEPRNSIGSS ISTTKSTNET ESNTTSGTLP RVFPCNYCQR KFFSSQALGG 120 HQNAHKRERM LAKRAMRMGI FSEKYASQLA AFTLHGTSLR SLEIKAHSSQ HHTWQPPLMR 180 MPQEITSISP PHTIGIMGLP IYVDDDRPDQ LLWPGSFREV AATGVDSLPE TSEMNMNSIR 240 PVYGGHVTPD LTLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66140.1	1e-33	C2H2 family protein