PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc028190.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 166aa    MW: 18765.9 Da    PI: 6.4162
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc028190.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB67.32.9e-2141934196
                  NF-YB 41 efisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96
                           e+ sfvt+ea+d+cqre+rkti+ +d   a+++ Gf+dy+epl+vyl++yre++g 
  Cse_sc028190.1_g010.1 41 EYHSFVTGEANDRCQREQRKTITVED---AMSKQGFHDYIEPLTVYLHRYREFDGR 93
                           999**********************9...89*********************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MVEKLKIEES KVADFCAQLY RDYRTTMTGL RAIGYDFDHD EYHSFVTGEA NDRCQREQRK  60
TITVEDAMSK QGFHDYIEPL TVYLHRYREF DGRERGSIRG EPLVKRTADE GHFGTSPFVP  120
AFHMGHHHNG FFGLASIGGF MKDPSSAGSS GPAAVASFEP YAQCKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.22e-24NF-YB family protein