PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc028472.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 405aa MW: 44688.1 Da PI: 4.6372

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc028472.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.4	4.3e-47	7	134	2	129
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 pGfrFhPtd+elv++yLkkkv gkk+ + +v++ev+iy++ PwdL+ k ++k+++ ew+fF++++kky++g+r nrat+ g+Wkatg Cse_sc028472.1_g020.1 7 IPGFRFHPTDSELVMYYLKKKVLGKKIIV-DVVTEVNIYEYSPWDLRdKsALKTGDLEWFFFCPKSKKYNSGSRYNRATEIGFWKATG 93 69**********************999.99**********85347777888*************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 kd++v+ +g++v + ktLvf+ g+a kge+tdWvmheyrle Cse_sc028472.1_g020.1 94 KDRNVTY-RGRTVATIKTLVFHIGHAGKGERTDWVMHEYRLE 134 ***.9999**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MARSSFIPGF RFHPTDSELV MYYLKKKVLG KKIIVDVVTE VNIYEYSPWD LRDKSALKTG 60 DLEWFFFCPK SKKYNSGSRY NRATEIGFWK ATGKDRNVTY RGRTVATIKT LVFHIGHAGK 120 GERTDWVMHE YRLEDEQLAN AGVVQDTYVL IKLFEKAGSG PKNGAQYGAP FNEEEWEDDD 180 IANCSNALAT VGPLEATTTN PLGYKQKGPA TGNMYEPGSS AVTCSANETT GNTNPLGYKQ 240 KGPATVNMYE PRLSAVTCSA NETTGKIAHY KQKSTAPMEM MVAPQITHNL CLTEPESSIV 300 TLSANERRGD VPVGGDDMMS LEDIAFLLGV SEDNNTNELV EVENVEKNDI MAPNADDGIY 360 NELVNLINLD EFNGGASASG SKPAVYMFDK PLDDLDFNLG AFYVD

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MARSSFIPGF RFHPTDSELV MYYLKKKVLG KKIIVDVVTE VNIYEYSPWD LRDKSALKTG  60
DLEWFFFCPK SKKYNSGSRY NRATEIGFWK ATGKDRNVTY RGRTVATIKT LVFHIGHAGK  120
GERTDWVMHE YRLEDEQLAN AGVVQDTYVL IKLFEKAGSG PKNGAQYGAP FNEEEWEDDD  180
IANCSNALAT VGPLEATTTN PLGYKQKGPA TGNMYEPGSS AVTCSANETT GNTNPLGYKQ  240
KGPATVNMYE PRLSAVTCSA NETTGKIAHY KQKSTAPMEM MVAPQITHNL CLTEPESSIV  300
TLSANERRGD VPVGGDDMMS LEDIAFLLGV SEDNNTNELV EVENVEKNDI MAPNADDGIY  360
NELVNLINLD EFNGGASASG SKPAVYMFDK PLDDLDFNLG AFYVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	5e-66	NAC family protein