PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc028626.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 259aa    MW: 28833.4 Da    PI: 9.8739
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc028626.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.48.3e-0781153278
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwev 78 
                            f++eYA+++GF  rk++ +k+   g    + + Csk g +  ++ +    + ++ e  ++C  + k k+ + + w v
  Cse_sc028626.1_g010.1  81 FFQEYAHQIGFGFRKTSVRKE---GDKRYYGLACSKRGVHVAKTAN-IVDSPEKYEYLMKCLNEAKEKLIDPSSWGV 153
                            9***************99998...556799********99998888.444455555556666665555555555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDVNVIDLNH SDSDILSFMD STNVVQDGSS LNHEHVEPSN VQSSPHPISI PSSPDTTQQV  60
STTKVPSAGM KFDSEEELQL FFQEYAHQIG FGFRKTSVRK EGDKRYYGLA CSKRGVHVAK  120
TANIVDSPEK YEYLMKCLNE AKEKLIDPSS WGVNHVSDST KKLLSPTKVR GKGRPPKRKK  180
SIVEKLTEKQ NKKNKKKASQ GKKDKVPAKR GSSIPNMVDK IGVNSIDMAC NTSDKHRAIS  240
VNENRRNEGF DLNQSASET
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168180KVRGKGRPPKRKK
2177197KRKKSIVEKLTEKQNKKNKKK
3177205KRKKSIVEKLTEKQNKKNKKKASQGKKDK