PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc028639.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family G2-like
Protein Properties Length: 280aa    MW: 31094 Da    PI: 6.2423
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc028639.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.21.3e-311975155
                G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ..kYRl 55
                           k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQ  kYRl
  Cse_sc028639.1_g010.1 19 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQvgKYRL 75
                           79*************************************************888998 PP
2Myb_DNA-binding582.1e-182169145
                           TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45
                           r+rWT e++e++vdav+qlGg+   t+k + r mg +g+t +++ks++q
  Cse_sc028639.1_g010.1 21 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQ 69
                           89**********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDVVNGSNGL NNSSSLASKQ RLRWTHELHE RFVDAVAQLG GPDRATPKGV LRVMGVQGLT  60
IYHVKSHLQV GKYRLAKYLP DSSSEGKAFD QKESGDMLSS LDGSSGMQIT EALKLQMEVQ  120
KRLHEQLEVQ RQLQLRIEAQ GKYLKKIIEE QQRLSGVLSE TPASEDNCLD SKNITDPVTP  180
APPAFESPIM ETAAKECVQV KNTCVDERGE PSTPDSGCHM DSPIENQLGE RSMKKQRVSM  240
SMGLTHQILE SSMRSPFHQQ QQSVYLTTEQ FGHSSGINED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.15e-85G2-like family protein