PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc028645.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 260aa MW: 29594.5 Da PI: 6.0579

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc028645.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.5	8.5e-15	13	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT............TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg............kgRtlkqcksrwqkyl 48 +g+WT++Ed ll ++++++G g W++I+ + g + R++k+c++rw++yl Cse_sc028645.1_g010.1 13 KGAWTPQEDMLLRNCIQKHGEGKWHLIPLKAGktfvllfnvragLSRCRKSCRLRWLNYL 72 79********************************************************97 PP
2	Myb_DNA-binding	46.5	8.2e-15	78	122	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++ Cse_sc028645.1_g010.1 78 KGDFEEDEIDLILRLHKLLGNR-WSLIAGRIP-GRTANDVKNYWNTH 122 67899***************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MRPSSSTGLR LKKGAWTPQE DMLLRNCIQK HGEGKWHLIP LKAGKTFVLL FNVRAGLSRC 60 RKSCRLRWLN YLRPNIKKGD FEEDEIDLIL RLHKLLGNRW SLIAGRIPGR TANDVKNYWN 120 THIRPRSNKQ NNEAKDITTA VTVIKPQPRI LSKTVNSNPP IAAPQDYNVI RSTHDGVETA 180 FDISSGLISS PIVSDAKINE YMVELFDNEE KEFDGEIGWS LDGSPFEGEA LDVEQEDGES 240 SVFDLPIDEF MWDFLNSDQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-57	MYB family protein