PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc028840.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 155aa    MW: 18015.2 Da    PI: 7.1788
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc028840.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR175.79.2e-2437126190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 
                            +f+ +Y+ ++GF+vrk+  +k+k+ng+it+++fvCskeg r++++++ ++++ +raetrt+C  ++ ++ +k  +k+++ +++ +HnH
  Cse_sc028840.1_g040.1  37 QFWINYGAHIGFDVRKQWINKNKKNGHITSARFVCSKEGIRKQDTRD-SHTKCPRAETRTNCLSRMGITYDKqANKYQLLDFVPDHNH 123
                            699*****************************************999.999*******************9999************** PP

                   FAR1  88 ela 90 
                             l 
  Cse_sc028840.1_g040.1 124 MLH 126
                            996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MDIDSSSQVK GSYIFKPSFG CEPRIGMEFD TLENAWQFWI NYGAHIGFDV RKQWINKNKK  60
NGHITSARFV CSKEGIRKQD TRDSHTKCPR AETRTNCLSR MGITYDKQAN KYQLLDFVPD  120
HNHMLHTQET VHMMSSQRNI SDVQAIEIDL ADEQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-18FAR1 family protein