PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc028919.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 170aa    MW: 18708.9 Da    PI: 9.3716
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc028919.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS149.72.7e-46215027176
                   GRAS  27 lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHi 114
                            l+ l+s  g+p++R+aay++e+L a l++s+s ++k+l+++e +    +e ++++ l++e++P++kf+hl aN aI e +++e+r+Hi
  Cse_sc028919.1_g030.1   2 LRPLVSVGGEPTERVAAYMMEGLVAWLSSSGSVICKSLKCKEPT---GAELFSYMMLLYEACPYFKFGHLSANGAIAETIKNEDRIHI 86 
                            56678999***********************************9...999************************************** PP

                   GRAS 115 iDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpf 176
                            i f+i qG+QW++L+qaLa+Rp+gpp+lRiTg++++++   s   l+ +g+rLak+ e++++p+
  Cse_sc028919.1_g030.1  87 IYFQIAQGGQWMTLIQALAARPGGPPRLRITGMDDSRNAfaSGGGLNIVGQRLAKLVESCKMPL 150
                            ***********************************988899*****************999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MLRPLVSVGG EPTERVAAYM MEGLVAWLSS SGSVICKSLK CKEPTGAELF SYMMLLYEAC  60
PYFKFGHLSA NGAIAETIKN EDRIHIIYFQ IAQGGQWMTL IQALAARPGG PPRLRITGMD  120
DSRNAFASGG GLNIVGQRLA KLVESCKMPL LHVNNLYHYY HTLKAISKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.12e-69GRAS family protein