PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc029063.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MIKC_MADS
Protein Properties Length: 129aa    MW: 14941.2 Da    PI: 6.2532
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc029063.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF37.43.2e-121292149
                           HHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
                 SRF-TF 21 lKKAeELSvLCdaevaviifsstgklyey 49
                           +KKA  LSvLCd+++av+ fs +gklye 
  Cse_sc029063.1_g010.1  1 MKKARHLSVLCDVDIAVLAFSARGKLYES 29
                           8**************************95 PP
2K-box15.95.5e-07881204476
                  K-box  44 esLslkeLqqLeqqLekslkkiRskKnellleq 76 
                            e+Ls+ ++ +Leq+L+  l + Rs+K  +++++
  Cse_sc029063.1_g010.1  88 EELSVTDMTELEQELDAVLVQTRSRKRWIIFTE 120
                            68************************9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MKKARHLSVL CDVDIAVLAF SARGKLYESC SGSTNSVDHI LSRFNEASLM QEREPTIELG  60
VLSQCTKFRT CKQLLHMVDR LVQENNNEEL SVTDMTELEQ ELDAVLVQTR SRKRWIIFTE  120
QLVYIRFVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30260.16e-19MIKC_MADS family protein